BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H01SP1|AL428451
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1376 1080 0.0
3x_Contig1591 134 2e-31
3x_Contig1088 111 2e-24
3x_Contig631 111 2e-24
3x_Contig582 111 2e-24
3x_Contig1747 109 9e-24
3x_Contig1718 109 9e-24
3x_Contig1204 109 9e-24
3x_Contig727 109 9e-24
>3x_Contig1376
Length = 7449
Score = 1080 bits (515), Expect = 0.0
Identities = 692/795 (87%)
Strand = Plus / Plus
Query: 1 ctggtaacgtgattgactcgtattcgttgccttgttaacmcatagaagccgtgaatagta 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6225 ctggtaacgtgattgactcgtattcgttgccttgttaaaacatagaagccgtgaatagta 6284
Query: 61 gtgtcgagttttgagtcaacaagcagatggtcgatctagaagacmmattmmmgggcagga 120
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 6285 gtgtcgagttttgagtcaacaagcagatggtcgatctagaagaaaaattaaagggcagga 6344
Query: 121 gggggcagagttatgtacccatagttggmgtcaggtagacttatctgctctamcmgtmga 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 6345 gggggcagagttatgtacccatagttggagtcaggtagacttatctgctctaaaagtaga 6404
Query: 181 magtygtccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggtt 240
||| |||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||
Sbjct: 6405 aagttgtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggtt 6464
Query: 241 cmmttccccgtcgcggagtgattttcymtmtctcyccctytttccgtaacttacattcct 300
| |||||||||||||||||||||| | | | | ||| |||||||||||||||
Sbjct: 6465 caattccccgtcgcggagtgattttttatatatttttattttttagtaacttacattcct 6524
Query: 301 tcaggtaaaggtcacaacgcgagtctgcyagamttmacgatgagttgtgtgtgamctttg 360
|||||||||||||||||||||||| ||| ||| || |||||||||||||||||| |||||
Sbjct: 6525 tcaggtaaaggtcacaacgcgagtatgctagaattaacgatgagttgtgtgtgaactttg 6584
Query: 361 actgacttacmaggcatggttaacmgttatccmacmcymcttatmccagggamacyygty 420
| ||| |||| ||| |||||||| ||||||| | | ||||| | ||||| | ||
Sbjct: 6585 aatgaattacaaggaatggttaaaagttatccaaaactacttatacaagggaaaattgtt 6644
Query: 421 accatyttccycycttttmmctmccattggcagcmcagctgamgactgagccatatgcct 480
|| || || ||||| | ||||||| ||| ||||||| ||||||||||||||| |
Sbjct: 6645 acaatttttttttcttttaaataccattggaagcacagctgaagactgagccatatgcat 6704
Query: 481 ctsaytggcaatygtcaatcayactttgaccagtagcgtatagaccaggtcccacmmyat 540
|| | ||| ||| || ||| | ||||||| |||||||||||||||||||||||| ||
Sbjct: 6705 ctgattggaaattgtaaatgatactttgaacagtagcgtatagaccaggtcccaaaatat 6764
Query: 541 cccycccgatagtcatgagaattcccgctatgatgacatgmmccttttcmmtcttmgtca 600
|||||||| |||||||||||||||||||||| ||| ||||||| |||| ||||
Sbjct: 6765 aaattccgatagtaatgagaattcccgctatgatgaaatgaaccttttcaatcttagtca 6824
Query: 601 agtacggatmagggttactctgcttgtatttmtyttgttttacctttaggtatgccatac 660
||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 6825 agtacggataagggttactctgcttgtatttattttgttttacctttaggtatgccatac 6884
Query: 661 cccagaatacatatccgaaccaacaatcgaataaagaacacatcaaggacaatagatctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6885 cccagaatacatatccgaaccaacaatcgaataaagaacacatcaaggacaatagatctg 6944
Query: 721 agaagaaaggaataacctctgcaatcacaaaggcacctacccaagtcaataacaataagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6945 agaagaaaggaataacctctgcaatcacaaaggcacctacccaagtcaataacaataagc 7004
Query: 781 caatccaagccaacc 795
|||||||||||||||
Sbjct: 7005 caatccaagccaacc 7019
>3x_Contig1591
Length = 14045
Score = 134 bits (64), Expect = 2e-31
Identities = 112/128 (87%)
Strand = Plus / Plus
Query: 639 tttacctttaggtatgccataccccagaatacatatccgaaccaacaatcgaataaagaa 698
|||||| |||||||||||||||||||||||||| |||||||||| || |||| || |||
Sbjct: 3883 tttacccttaggtatgccataccccagaatacaaatccgaaccagcaggcgaacaaggaa 3942
Query: 699 cacatcaaggacaatagatctgagaagaaaggaataacctctgcaatcacaaaggcacct 758
|||||||| || ||||||||||||||||||||||| || ||||||| | ||||||| ||
Sbjct: 3943 cacatcaaagataatagatctgagaagaaaggaatcacttctgcaacaataaaggcaact 4002
Query: 759 acccaagt 766
| ||||||
Sbjct: 4003 atccaagt 4010
>3x_Contig1088
Length = 4585
Score = 111 bits (53), Expect = 2e-24
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 186 gtccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggttcmmtt 245
|||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||| ||
Sbjct: 1439 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 1498
Query: 246 ccccgtcgcggag 258
|||||||||||||
Sbjct: 1499 ccccgtcgcggag 1511
>3x_Contig631
Length = 2339
Score = 111 bits (53), Expect = 2e-24
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 187 tccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggttcmmttc 246
||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||| |||
Sbjct: 1080 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1021
Query: 247 cccgtcgcggagt 259
|||||||||||||
Sbjct: 1020 cccgtcgcggagt 1008
>3x_Contig582
Length = 2827
Score = 111 bits (53), Expect = 2e-24
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 186 gtccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggttcmmtt 245
|||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||| ||
Sbjct: 1713 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 1772
Query: 246 ccccgtcgcggag 258
|||||||||||||
Sbjct: 1773 ccccgtcgcggag 1785
>3x_Contig1747
Length = 15671
Score = 109 bits (52), Expect = 9e-24
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 187 tccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggttcmmttc 246
||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||| |||
Sbjct: 2462 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 2403
Query: 247 cccgtcgcggag 258
||||||||||||
Sbjct: 2402 cccgtcgcggag 2391
>3x_Contig1718
Length = 19496
Score = 109 bits (52), Expect = 9e-24
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 187 tccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggttcmmttc 246
||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||| |||
Sbjct: 4332 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 4273
Query: 247 cccgtcgcggag 258
||||||||||||
Sbjct: 4272 cccgtcgcggag 4261
>3x_Contig1204
Length = 5869
Score = 109 bits (52), Expect = 9e-24
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 187 tccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggttcmmttc 246
||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||| |||
Sbjct: 5718 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 5777
Query: 247 cccgtcgcggag 258
||||||||||||
Sbjct: 5778 cccgtcgcggag 5789
>3x_Contig727
Length = 2486
Score = 109 bits (52), Expect = 9e-24
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 187 tccgcsatagtytmmtggttagmmttcgcgcttgtcgcgtgcsagaycggggttcmmttc 246
||||| ||||| | ||||||| |||||||||||||||||| ||| |||||||| |||
Sbjct: 1173 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1114
Query: 247 cccgtcgcggag 258
||||||||||||
Sbjct: 1113 cccgtcgcggag 1102
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.723 1.37
Gapped
Lambda K H
1.45 0.723 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2030
Number of Sequences: 1807
Number of extensions: 2030
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 9
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.4 bits)
S1: 11 (23.5 bits)
S2: 48 (101.1 bits)